PSCF v1.3
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Field Generator for external fields in thin-film systems. More...
#include <FilmFieldGenExt.h>
Public Member Functions | |
FilmFieldGenExt () | |
Default constructor. | |
FilmFieldGenExt (System< D > &sys) | |
Constructor. | |
~FilmFieldGenExt () | |
Destructor. | |
double | stress (int paramId) const |
Get contribution to the stress from the external fields. | |
Public Member Functions inherited from Pscf::Prdc::FilmFieldGenExtBase< D > | |
FilmFieldGenExtBase () | |
Constructor. | |
~FilmFieldGenExtBase () | |
Destructor. | |
void | readParameters (std::istream &in) |
Read parameters and initialize. | |
bool | needsUpdate () const |
Check whether system has changed such that the fields need updating. | |
void | checkCompatibility () |
Check that the system is compatible with these fields. | |
bool | hasSymmetricWalls () const |
Are the walls chemically identical? | |
bool | isAthermal () const |
Are the walls athermal? | |
GArray< ParameterType > | getParameterTypes () |
Return specialized sweep parameter types to add to the Sweep object. | |
void | setParameter (std::string name, DArray< int > ids, double value, bool &success) |
Set the value of a specialized sweep parameter. | |
double | getParameter (std::string name, DArray< int > ids, bool &success) const |
Get the value of a specialized sweep parameter. | |
DArray< double > const & | chiBottom () const |
Get const chiBottom matrix by reference. | |
DArray< double > const & | chiTop () const |
Get const chiTop array by reference. | |
double | chiBottom (int s) const |
Get the chi parameter between the bottom wall and species s. | |
double | chiTop (int s) const |
Get the chi parameter between the top wall and species s. | |
int | normalVecId () const |
Get value of normalVecId. | |
double | interfaceThickness () const |
Get value of interfaceThickness. | |
double | excludedThickness () const |
Get value of excludedThickness. | |
void | setParameter (std::string name, DArray< int > ids, double value) |
Set the value of a specialized sweep parameter. | |
double | getParameter (std::string name, DArray< int > ids) const |
Get the value of a specialized sweep parameter. | |
Public Member Functions inherited from Pscf::Prdc::FieldGenerator | |
FieldGenerator () | |
Constructor. | |
~FieldGenerator () | |
Destructor. | |
virtual double | modifyStress (int paramId, double stress) const |
Modify stress to minimize a property other than fHelmholtz. | |
Public Member Functions inherited from Pscf::FieldGeneratorBase | |
FieldGeneratorBase () | |
Constructor. | |
~FieldGeneratorBase () | |
Destructor. | |
void | generate () |
Checks if fields need to be (re)generated. | |
Type | type () const |
Return Type enumeration value (Mask, External, or None) | |
bool | isDependent () const |
Is this object dependent on parameters of another FieldGeneratorBase? | |
Public Member Functions inherited from Util::ParamComposite | |
ParamComposite () | |
Constructor. | |
ParamComposite (const ParamComposite &other) | |
Copy constructor. | |
ParamComposite (int capacity) | |
Constructor. | |
virtual | ~ParamComposite () |
Virtual destructor. | |
void | resetParam () |
Resets ParamComposite to its empty state. | |
virtual void | readParam (std::istream &in) |
Read the parameter file block. | |
virtual void | readParamOptional (std::istream &in) |
Read optional parameter file block. | |
virtual void | writeParam (std::ostream &out) const |
Write all parameters to an output stream. | |
virtual void | load (Serializable::IArchive &ar) |
Load all parameters from an input archive. | |
virtual void | loadOptional (Serializable::IArchive &ar) |
Load an optional ParamComposite. | |
virtual void | loadParameters (Serializable::IArchive &ar) |
Load state from archive, without adding Begin and End lines. | |
virtual void | save (Serializable::OArchive &ar) |
Saves all parameters to an archive. | |
void | saveOptional (Serializable::OArchive &ar) |
Saves isActive flag, and then calls save() iff isActive is true. | |
void | readParamComposite (std::istream &in, ParamComposite &child, bool next=true) |
Add and read a required child ParamComposite. | |
void | readParamCompositeOptional (std::istream &in, ParamComposite &child, bool next=true) |
Add and attempt to read an optional child ParamComposite. | |
template<typename Type> | |
ScalarParam< Type > & | read (std::istream &in, const char *label, Type &value) |
Add and read a new required ScalarParam < Type > object. | |
template<typename Type> | |
ScalarParam< Type > & | readOptional (std::istream &in, const char *label, Type &value) |
Add and read a new optional ScalarParam < Type > object. | |
template<typename Type> | |
CArrayParam< Type > & | readCArray (std::istream &in, const char *label, Type *value, int n) |
Add and read a required C array parameter. | |
template<typename Type> | |
CArrayParam< Type > & | readOptionalCArray (std::istream &in, const char *label, Type *value, int n) |
Add and read an optional C array parameter. | |
template<typename Type> | |
DArrayParam< Type > & | readDArray (std::istream &in, const char *label, DArray< Type > &array, int n) |
Add and read a required DArray < Type > parameter. | |
template<typename Type> | |
DArrayParam< Type > & | readOptionalDArray (std::istream &in, const char *label, DArray< Type > &array, int n) |
Add and read an optional DArray < Type > parameter. | |
template<typename Type, int N> | |
FArrayParam< Type, N > & | readFArray (std::istream &in, const char *label, FArray< Type, N > &array) |
Add and read a required FArray < Type, N > array parameter. | |
template<typename Type, int N> | |
FArrayParam< Type, N > & | readOptionalFArray (std::istream &in, const char *label, FArray< Type, N > &array) |
Add and read an optional FArray < Type, N > array parameter. | |
template<typename Type, int N> | |
FSArrayParam< Type, N > & | readFSArray (std::istream &in, const char *label, FSArray< Type, N > &array, int size) |
Add and read a required FSArray < Type, N > array parameter. | |
template<typename Type, int N> | |
FSArrayParam< Type, N > & | readOptionalFSArray (std::istream &in, const char *label, FSArray< Type, N > &array, int size) |
Add and read an optional FSArray < Type, N > array parameter. | |
template<typename Type> | |
CArray2DParam< Type > & | readCArray2D (std::istream &in, const char *label, Type *value, int m, int n, int np) |
Add and read a required CArray2DParam < Type > 2D C-array. | |
template<typename Type> | |
CArray2DParam< Type > & | readOptionalCArray2D (std::istream &in, const char *label, Type *value, int m, int n, int np) |
Add and read an optional CArray2DParam < Type > 2D C-array parameter. | |
template<typename Type> | |
DMatrixParam< Type > & | readDMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n) |
Add and read a required DMatrix < Type > matrix parameter. | |
template<typename Type> | |
DMatrixParam< Type > & | readOptionalDMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n) |
Add and read an optional DMatrix < Type > matrix parameter. | |
template<typename Type> | |
DSymmMatrixParam< Type > & | readDSymmMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int n) |
Add and read a required symmetrix DMatrix. | |
template<typename Type> | |
DSymmMatrixParam< Type > & | readOptionalDSymmMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int n) |
Add and read an optional DMatrix matrix parameter. | |
Begin & | readBegin (std::istream &in, const char *label, bool isRequired=true) |
Add and read a class label and opening bracket. | |
End & | readEnd (std::istream &in) |
Add and read the closing bracket. | |
Blank & | readBlank (std::istream &in) |
Add and read a new Blank object, representing a blank line. | |
void | loadParamComposite (Serializable::IArchive &ar, ParamComposite &child, bool next=true) |
Add and load a required child ParamComposite. | |
void | loadParamCompositeOptional (Serializable::IArchive &ar, ParamComposite &child, bool next=true) |
Add and load an optional child ParamComposite if isActive. | |
template<typename Type> | |
ScalarParam< Type > & | loadParameter (Serializable::IArchive &ar, const char *label, Type &value, bool isRequired) |
Add and load a new ScalarParam < Type > object. | |
template<typename Type> | |
ScalarParam< Type > & | loadParameter (Serializable::IArchive &ar, const char *label, Type &value) |
Add and load new required ScalarParam < Type > object. | |
template<typename Type> | |
CArrayParam< Type > & | loadCArray (Serializable::IArchive &ar, const char *label, Type *value, int n, bool isRequired) |
Add a C array parameter and load its elements. | |
template<typename Type> | |
CArrayParam< Type > & | loadCArray (Serializable::IArchive &ar, const char *label, Type *value, int n) |
Add and load a required CArrayParam< Type > array parameter. | |
template<typename Type> | |
DArrayParam< Type > & | loadDArray (Serializable::IArchive &ar, const char *label, DArray< Type > &array, int n, bool isRequired) |
Add an load a DArray < Type > array parameter. | |
template<typename Type> | |
DArrayParam< Type > & | loadDArray (Serializable::IArchive &ar, const char *label, DArray< Type > &array, int n) |
Add and load a required DArray< Type > array parameter. | |
template<typename Type, int N> | |
FArrayParam< Type, N > & | loadFArray (Serializable::IArchive &ar, const char *label, FArray< Type, N > &array, bool isRequired) |
Add and load an FArray < Type, N > fixed-size array parameter. | |
template<typename Type, int N> | |
FArrayParam< Type, N > & | loadFArray (Serializable::IArchive &ar, const char *label, FArray< Type, N > &array) |
Add and load a required FArray < Type > array parameter. | |
template<typename Type, int N> | |
FSArrayParam< Type, N > & | loadFSArray (Serializable::IArchive &ar, const char *label, FSArray< Type, N > &array, int size, bool isRequired) |
Add and load an FSArray < Type, N > array parameter. | |
template<typename Type, int N> | |
FSArrayParam< Type, N > & | loadFSArray (Serializable::IArchive &ar, const char *label, FSArray< Type, N > &array, int size) |
Add and load a required FSArray < Type > array parameter. | |
template<typename Type> | |
CArray2DParam< Type > & | loadCArray2D (Serializable::IArchive &ar, const char *label, Type *value, int m, int n, int np, bool isRequired) |
Add and load a CArray2DParam < Type > C 2D array parameter. | |
template<typename Type> | |
CArray2DParam< Type > & | loadCArray2D (Serializable::IArchive &ar, const char *label, Type *value, int m, int n, int np) |
Add and load a required < Type > matrix parameter. | |
template<typename Type> | |
DMatrixParam< Type > & | loadDMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int m, int n, bool isRequired) |
Add and load a DMatrixParam < Type > matrix parameter. | |
template<typename Type> | |
DMatrixParam< Type > & | loadDMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int m, int n) |
Add and load a required DMatrixParam < Type > matrix parameter. | |
template<typename Type> | |
DSymmMatrixParam< Type > & | loadDSymmMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int n, bool isRequired) |
Add and load a symmetric DSymmMatrixParam < Type > matrix parameter. | |
template<typename Type> | |
DSymmMatrixParam< Type > & | loadDSymmMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int n) |
Add and load a required DSymmMatrixParam < Type > matrix parameter. | |
void | addParamComposite (ParamComposite &child, bool next=true) |
Add a child ParamComposite object to the format array. | |
Begin & | addBegin (const char *label) |
Add a Begin object representing a class name and bracket. | |
End & | addEnd () |
Add a closing bracket. | |
Blank & | addBlank () |
Create and add a new Blank object, representing a blank line. | |
std::string | className () const |
Get class name string. | |
bool | isRequired () const |
Is this ParamComposite required in the input file? | |
bool | isActive () const |
Is this parameter active? | |
Public Member Functions inherited from Util::ParamComponent | |
virtual | ~ParamComponent () |
Destructor. | |
void | setIndent (const ParamComponent &parent, bool next=true) |
Set indent level. | |
std::string | indent () const |
Return indent string for this object (string of spaces). | |
template<class Archive> | |
void | serialize (Archive &ar, const unsigned int version) |
Serialize this ParamComponent as a string. | |
Public Member Functions inherited from Util::Serializable | |
virtual | ~Serializable () |
Destructor. | |
Public Member Functions inherited from Util::MpiFileIo | |
MpiFileIo () | |
Constructor. | |
MpiFileIo (const MpiFileIo &other) | |
Copy constructor. | |
bool | isIoProcessor () const |
Can this processor do file I/O ? | |
Public Member Functions inherited from Pscf::ParameterModifier | |
ParameterModifier () | |
Constructor. | |
~ParameterModifier () | |
Destructor. | |
void | setParameter (std::string name, DArray< int > ids, double value) |
Set the value of a specialized sweep parameter. | |
double | getParameter (std::string name, DArray< int > ids) const |
Get the value of a specialized sweep parameter. |
Protected Member Functions | |
void | compute () |
Compute the fields and store where the System can access. | |
System< D > & | system () |
Get the parent System by non-const reference. | |
System< D > const & | system () const |
Get the parent System by const reference. | |
std::string | systemSpaceGroup () const |
Get the space group name for this system. | |
RealVec< D > | systemLatticeVector (int id) const |
Get one of the lattice vectors for this system. | |
int | systemNMonomer () const |
Get the number of monomer species for this system. | |
void | setClassName (const char *className) |
Set class name string. | |
void | setClassName (const char *className) |
Set class name string. | |
void | setIsRequired (bool isRequired) |
Set or unset the isActive flag. | |
void | setIsActive (bool isActive) |
Set or unset the isActive flag. | |
void | setParent (ParamComponent ¶m, bool next=true) |
Set this to the parent of a child component. | |
void | addComponent (ParamComponent ¶m, bool isLeaf=true) |
Add a new ParamComponent object to the format array. | |
template<typename Type> | |
ScalarParam< Type > & | add (std::istream &in, const char *label, Type &value, bool isRequired=true) |
Add a new required ScalarParam < Type > object. | |
template<typename Type> | |
CArrayParam< Type > & | addCArray (std::istream &in, const char *label, Type *value, int n, bool isRequired=true) |
Add (but do not read) a required C array parameter. | |
template<typename Type> | |
DArrayParam< Type > & | addDArray (std::istream &in, const char *label, DArray< Type > &array, int n, bool isRequired=true) |
Add (but do not read) a DArray < Type > parameter. | |
template<typename Type, int N> | |
FArrayParam< Type, N > & | addFArray (std::istream &in, const char *label, FArray< Type, N > &array, bool isRequired=true) |
Add (but do not read) a FArray < Type, N > array parameter. | |
template<typename Type, int N> | |
FSArrayParam< Type, N > & | addFSArray (std::istream &in, const char *label, FSArray< Type, N > &array, int size, bool isRequired=true) |
Add (but do not read) a FSArray < Type, N > array parameter. | |
template<typename Type> | |
CArray2DParam< Type > & | addCArray2D (std::istream &in, const char *label, Type *value, int m, int n, int np, bool isRequired=true) |
Add (but do not read) a CArray2DParam < Type > 2D C-array. | |
template<typename Type> | |
DMatrixParam< Type > & | addDMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n, bool isRequired=true) |
Add and read a required DMatrix < Type > matrix parameter. | |
Protected Member Functions inherited from Util::ParamComponent | |
ParamComponent () | |
Constructor. | |
ParamComponent (const ParamComponent &other) | |
Copy constructor. |
Additional Inherited Members | |
Public Types inherited from Pscf::FieldGeneratorBase | |
enum | Type |
Enum representing the type of field (mask, external field, or none). More... | |
Public Types inherited from Util::Serializable | |
typedef BinaryFileOArchive | OArchive |
Type of output archive used by save method. | |
typedef BinaryFileIArchive | IArchive |
Type of input archive used by load method. | |
Static Public Member Functions inherited from Util::ParamComponent | |
static void | initStatic () |
Initialize static echo member to false. | |
static void | setEcho (bool echo=true) |
Enable or disable echoing for all subclasses of ParamComponent. | |
static bool | echo () |
Get echo parameter. | |
Protected Attributes inherited from Pscf::Prdc::FilmFieldGenExtBase< D > | |
RealVec< D > | normalVecCurrent_ |
The lattice vector normal to the film used to generate these fields. | |
DArray< double > | chiBottomCurrent_ |
The chiBottom array used to generate the current external fields. | |
DArray< double > | chiTopCurrent_ |
The chiTop array used to generate the current external fields. | |
Protected Attributes inherited from Pscf::FieldGeneratorBase | |
Type | type_ |
Type of field (Mask, External, or None). | |
bool | isDependent_ |
Is this object dependent on parameters of another FieldGeneratorBase? |
Field Generator for external fields in thin-film systems.
The parent FilmFieldGenExtBase class template defines all traits of a FilmFieldGenExt that do not require access to the System. This subclass defines all methods that need System access.
If the user chooses an FilmFieldGenExt object to generate external fields, the external fields will have the same shape as the mask, with a magnitude defined by a Flory–Huggins-like chi parameter. This class is specific to thin-film systems because it also allows for a different chi parameter to be defined on the top boundary than on the bottom, through user input arrays chi_bottom and chi_top. See Thin-Film Confinement for more information.
Definition at line 38 of file rpc/environment/FilmFieldGenExt.h.
Pscf::Rpc::FilmFieldGenExt< D >::FilmFieldGenExt | ( | ) |
Default constructor.
Definition at line 31 of file rpc/environment/FilmFieldGenExt.tpp.
References Pscf::Prdc::FilmFieldGenExtBase< D >::FilmFieldGenExtBase(), and setClassName().
Pscf::Rpc::FilmFieldGenExt< D >::FilmFieldGenExt | ( | System< D > & | sys | ) |
Constructor.
sys | parent System object |
Definition at line 40 of file rpc/environment/FilmFieldGenExt.tpp.
References Pscf::Prdc::FilmFieldGenExtBase< D >::FilmFieldGenExtBase(), and setClassName().
Pscf::Rpc::FilmFieldGenExt< D >::~FilmFieldGenExt | ( | ) |
Destructor.
Definition at line 49 of file rpc/environment/FilmFieldGenExt.tpp.
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virtual |
Get contribution to the stress from the external fields.
The external fields defined by this class change in a non-affine manner upon changing the lattice parameter corresponding to normalVecId. Thus, if this lattice parameter is allowed to be flexible, the "stress" used to optimize the parameter must contain an additional term arising from the external fields. This method evaluates this term and returns its value.
paramId | index of the lattice parameter being varied |
Implements Pscf::Prdc::FilmFieldGenExtBase< D >.
Definition at line 56 of file rpc/environment/FilmFieldGenExt.tpp.
References Pscf::Prdc::Cpu::RField< D >::allocate(), Pscf::Prdc::FilmFieldGenExtBase< D >::chiBottom(), Pscf::Prdc::FilmFieldGenExtBase< D >::chiTop(), Pscf::Prdc::convertFullParamIdToReduced(), Pscf::Prdc::FilmFieldGenExtBase< D >::interfaceThickness(), Pscf::Prdc::FilmFieldGenExtBase< D >::isAthermal(), Pscf::Prdc::FilmFieldGenExtBase< D >::normalVecId(), system(), and UTIL_CHECK.
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protectedvirtual |
Compute the fields and store where the System can access.
Implements Pscf::Prdc::FilmFieldGenExtBase< D >.
Definition at line 153 of file rpc/environment/FilmFieldGenExt.tpp.
References Util::DArray< Data >::allocate(), Pscf::Prdc::FilmFieldGenExtBase< D >::chiBottom(), Pscf::Prdc::FilmFieldGenExtBase< D >::chiBottomCurrent_, Pscf::Prdc::FilmFieldGenExtBase< D >::chiTop(), Pscf::Prdc::FilmFieldGenExtBase< D >::chiTopCurrent_, Pscf::Prdc::FilmFieldGenExtBase< D >::isAthermal(), Pscf::Prdc::FilmFieldGenExtBase< D >::normalVecCurrent_, Pscf::Prdc::FilmFieldGenExtBase< D >::normalVecId(), system(), systemLatticeVector(), systemNMonomer(), and UTIL_CHECK.
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protected |
Get the parent System by non-const reference.
Definition at line 134 of file rpc/environment/FilmFieldGenExt.h.
References UTIL_CHECK.
Referenced by compute(), stress(), systemLatticeVector(), systemNMonomer(), and systemSpaceGroup().
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protected |
Get the parent System by const reference.
Definition at line 142 of file rpc/environment/FilmFieldGenExt.h.
References UTIL_CHECK.
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inlineprotectedvirtual |
Get the space group name for this system.
Implements Pscf::Prdc::FilmFieldGenExtBase< D >.
Definition at line 150 of file rpc/environment/FilmFieldGenExt.h.
References system().
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inlineprotectedvirtual |
Get one of the lattice vectors for this system.
id | index of the desired lattice vector |
Implements Pscf::Prdc::FilmFieldGenExtBase< D >.
Definition at line 155 of file rpc/environment/FilmFieldGenExt.h.
References system().
Referenced by compute().
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inlineprotectedvirtual |
Get the number of monomer species for this system.
Implements Pscf::Prdc::FilmFieldGenExtBase< D >.
Definition at line 160 of file rpc/environment/FilmFieldGenExt.h.
References system().
Referenced by compute().
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protected |
Set class name string.
Should be set in subclass constructor.
Definition at line 900 of file ParamComposite.cpp.
Referenced by FilmFieldGenExt(), and FilmFieldGenExt().