PSCF v1.1
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A distribution (or histogram) of values for an int variable. More...
#include <IntDistribution.h>
Public Member Functions | |
IntDistribution () | |
Default constructor. More... | |
IntDistribution (const IntDistribution &other) | |
Copy constructor. More... | |
IntDistribution & | operator= (const IntDistribution &other) |
Assignment operator. More... | |
virtual | ~IntDistribution () |
Destructor. More... | |
void | readParameters (std::istream &in) |
Read parameters from file and initialize. More... | |
void | setParam (int min, int max) |
Set parameters and initialize. More... | |
virtual void | loadParameters (Serializable::IArchive &ar) |
Load state from an archive. More... | |
virtual void | save (Serializable::OArchive &ar) |
Save state to an archive. More... | |
template<class Archive > | |
void | serialize (Archive &ar, const unsigned int version) |
Serialize to/from an archive. More... | |
void | clear () |
Clear (i.e., zero) previously allocated histogram. More... | |
void | sample (int value) |
Sample a value. More... | |
void | output (std::ostream &out) |
Output the distribution to file. More... | |
int | binIndex (int value) |
Return the index of the bin for a value. More... | |
int | min () const |
Get minimum value in range of histogram. More... | |
int | max () const |
Get maximum value in range of histogram. More... | |
int | nBin () const |
Get the number of bins. More... | |
const DArray< long > & | data () const |
Get histogram array. More... | |
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ParamComposite () | |
Constructor. More... | |
ParamComposite (const ParamComposite &other) | |
Copy constructor. More... | |
ParamComposite (int capacity) | |
Constructor. More... | |
virtual | ~ParamComposite () |
Virtual destructor. More... | |
void | resetParam () |
Resets ParamComposite to its empty state. More... | |
virtual void | readParam (std::istream &in) |
Read the parameter file block. More... | |
virtual void | readParamOptional (std::istream &in) |
Read optional parameter file block. More... | |
virtual void | writeParam (std::ostream &out) const |
Write all parameters to an output stream. More... | |
virtual void | load (Serializable::IArchive &ar) |
Load all parameters from an input archive. More... | |
virtual void | loadOptional (Serializable::IArchive &ar) |
Load an optional ParamComposite. More... | |
void | saveOptional (Serializable::OArchive &ar) |
Saves isActive flag, and then calls save() iff isActive is true. More... | |
void | readParamComposite (std::istream &in, ParamComposite &child, bool next=true) |
Add and read a required child ParamComposite. More... | |
void | readParamCompositeOptional (std::istream &in, ParamComposite &child, bool next=true) |
Add and attempt to read an optional child ParamComposite. More... | |
template<typename Type > | |
ScalarParam< Type > & | read (std::istream &in, const char *label, Type &value) |
Add and read a new required ScalarParam < Type > object. More... | |
template<typename Type > | |
ScalarParam< Type > & | readOptional (std::istream &in, const char *label, Type &value) |
Add and read a new optional ScalarParam < Type > object. More... | |
template<typename Type > | |
CArrayParam< Type > & | readCArray (std::istream &in, const char *label, Type *value, int n) |
Add and read a required C array parameter. More... | |
template<typename Type > | |
CArrayParam< Type > & | readOptionalCArray (std::istream &in, const char *label, Type *value, int n) |
Add and read an optional C array parameter. More... | |
template<typename Type > | |
DArrayParam< Type > & | readDArray (std::istream &in, const char *label, DArray< Type > &array, int n) |
Add and read a required DArray < Type > parameter. More... | |
template<typename Type > | |
DArrayParam< Type > & | readOptionalDArray (std::istream &in, const char *label, DArray< Type > &array, int n) |
Add and read an optional DArray < Type > parameter. More... | |
template<typename Type , int N> | |
FArrayParam< Type, N > & | readFArray (std::istream &in, const char *label, FArray< Type, N > &array) |
Add and read a required FArray < Type, N > array parameter. More... | |
template<typename Type , int N> | |
FArrayParam< Type, N > & | readOptionalFArray (std::istream &in, const char *label, FArray< Type, N > &array) |
Add and read an optional FArray < Type, N > array parameter. More... | |
template<typename Type , int N> | |
FSArrayParam< Type, N > & | readFSArray (std::istream &in, const char *label, FSArray< Type, N > &array, int size) |
Add and read a required FSArray < Type, N > array parameter. More... | |
template<typename Type , int N> | |
FSArrayParam< Type, N > & | readOptionalFSArray (std::istream &in, const char *label, FSArray< Type, N > &array, int size) |
Add and read an optional FSArray < Type, N > array parameter. More... | |
template<typename Type > | |
CArray2DParam< Type > & | readCArray2D (std::istream &in, const char *label, Type *value, int m, int n, int np) |
Add and read a required CArray2DParam < Type > 2D C-array. More... | |
template<typename Type > | |
CArray2DParam< Type > & | readOptionalCArray2D (std::istream &in, const char *label, Type *value, int m, int n, int np) |
Add and read an optional CArray2DParam < Type > 2D C-array parameter. More... | |
template<typename Type > | |
DMatrixParam< Type > & | readDMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n) |
Add and read a required DMatrix < Type > matrix parameter. More... | |
template<typename Type > | |
DMatrixParam< Type > & | readOptionalDMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n) |
Add and read an optional DMatrix < Type > matrix parameter. More... | |
template<typename Type > | |
DSymmMatrixParam< Type > & | readDSymmMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int n) |
Add and read a required symmetrix DMatrix. More... | |
template<typename Type > | |
DSymmMatrixParam< Type > & | readOptionalDSymmMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int n) |
Add and read an optional DMatrix matrix parameter. More... | |
Begin & | readBegin (std::istream &in, const char *label, bool isRequired=true) |
Add and read a class label and opening bracket. More... | |
End & | readEnd (std::istream &in) |
Add and read the closing bracket. More... | |
Blank & | readBlank (std::istream &in) |
Add and read a new Blank object, representing a blank line. More... | |
void | loadParamComposite (Serializable::IArchive &ar, ParamComposite &child, bool next=true) |
Add and load a required child ParamComposite. More... | |
void | loadParamCompositeOptional (Serializable::IArchive &ar, ParamComposite &child, bool next=true) |
Add and load an optional child ParamComposite if isActive. More... | |
template<typename Type > | |
ScalarParam< Type > & | loadParameter (Serializable::IArchive &ar, const char *label, Type &value, bool isRequired) |
Add and load a new ScalarParam < Type > object. More... | |
template<typename Type > | |
ScalarParam< Type > & | loadParameter (Serializable::IArchive &ar, const char *label, Type &value) |
Add and load new required ScalarParam < Type > object. More... | |
template<typename Type > | |
CArrayParam< Type > & | loadCArray (Serializable::IArchive &ar, const char *label, Type *value, int n, bool isRequired) |
Add a C array parameter and load its elements. More... | |
template<typename Type > | |
CArrayParam< Type > & | loadCArray (Serializable::IArchive &ar, const char *label, Type *value, int n) |
Add and load a required CArrayParam< Type > array parameter. More... | |
template<typename Type > | |
DArrayParam< Type > & | loadDArray (Serializable::IArchive &ar, const char *label, DArray< Type > &array, int n, bool isRequired) |
Add an load a DArray < Type > array parameter. More... | |
template<typename Type > | |
DArrayParam< Type > & | loadDArray (Serializable::IArchive &ar, const char *label, DArray< Type > &array, int n) |
Add and load a required DArray< Type > array parameter. More... | |
template<typename Type , int N> | |
FArrayParam< Type, N > & | loadFArray (Serializable::IArchive &ar, const char *label, FArray< Type, N > &array, bool isRequired) |
Add and load an FArray < Type, N > fixed-size array parameter. More... | |
template<typename Type , int N> | |
FArrayParam< Type, N > & | loadFArray (Serializable::IArchive &ar, const char *label, FArray< Type, N > &array) |
Add and load a required FArray < Type > array parameter. More... | |
template<typename Type , int N> | |
FSArrayParam< Type, N > & | loadFSArray (Serializable::IArchive &ar, const char *label, FSArray< Type, N > &array, int size, bool isRequired) |
Add and load an FSArray < Type, N > array parameter. More... | |
template<typename Type , int N> | |
FSArrayParam< Type, N > & | loadFSArray (Serializable::IArchive &ar, const char *label, FSArray< Type, N > &array, int size) |
Add and load a required FSArray < Type > array parameter. More... | |
template<typename Type > | |
CArray2DParam< Type > & | loadCArray2D (Serializable::IArchive &ar, const char *label, Type *value, int m, int n, int np, bool isRequired) |
Add and load a CArray2DParam < Type > C 2D array parameter. More... | |
template<typename Type > | |
CArray2DParam< Type > & | loadCArray2D (Serializable::IArchive &ar, const char *label, Type *value, int m, int n, int np) |
Add and load a required < Type > matrix parameter. More... | |
template<typename Type > | |
DMatrixParam< Type > & | loadDMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int m, int n, bool isRequired) |
Add and load a DMatrixParam < Type > matrix parameter. More... | |
template<typename Type > | |
DMatrixParam< Type > & | loadDMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int m, int n) |
Add and load a required DMatrixParam < Type > matrix parameter. More... | |
template<typename Type > | |
DSymmMatrixParam< Type > & | loadDSymmMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int n, bool isRequired) |
Add and load a symmetric DSymmMatrixParam < Type > matrix parameter. More... | |
template<typename Type > | |
DSymmMatrixParam< Type > & | loadDSymmMatrix (Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int n) |
Add and load a required DSymmMatrixParam < Type > matrix parameter. More... | |
void | addParamComposite (ParamComposite &child, bool next=true) |
Add a child ParamComposite object to the format array. More... | |
Begin & | addBegin (const char *label) |
Add a Begin object representing a class name and bracket. More... | |
End & | addEnd () |
Add a closing bracket. More... | |
Blank & | addBlank () |
Create and add a new Blank object, representing a blank line. More... | |
std::string | className () const |
Get class name string. More... | |
bool | isRequired () const |
Is this ParamComposite required in the input file? More... | |
bool | isActive () const |
Is this parameter active? More... | |
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virtual | ~ParamComponent () |
Destructor. More... | |
virtual void | readParam (std::istream &in)=0 |
Read parameter(s) from file. More... | |
virtual void | writeParam (std::ostream &out) const =0 |
Read parameter(s) to file. More... | |
virtual void | load (Serializable::IArchive &ar) |
Load internal state from an archive. More... | |
virtual void | save (Serializable::OArchive &ar) |
Save internal state to an archive. More... | |
virtual void | resetParam () |
Nontrivial implementation provided by ParamComposite subclass. More... | |
void | setIndent (const ParamComponent &parent, bool next=true) |
Set indent level. More... | |
std::string | indent () const |
Return indent string for this object (string of spaces). More... | |
template<class Archive > | |
void | serialize (Archive &ar, const unsigned int version) |
Serialize this ParamComponent as a string. More... | |
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virtual | ~Serializable () |
Destructor. More... | |
virtual void | save (OArchive &ar)=0 |
Save to an archive. More... | |
virtual void | load (IArchive &ar)=0 |
Load from an archive. More... | |
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MpiFileIo () | |
Constructor. More... | |
MpiFileIo (const MpiFileIo &other) | |
Copy constructor. More... | |
bool | isIoProcessor () const |
Can this processor do file I/O ? More... | |
void | setIoCommunicator (MPI::Intracomm &communicator) |
Set the communicator. More... | |
void | clearCommunicator () |
Clear (nullify) the communicator. More... | |
bool | hasIoCommunicator () const |
Does this object have an associated MPI communicator? More... | |
MPI::Intracomm & | ioCommunicator () const |
Get the MPI communicator by reference. More... | |
Protected Attributes | |
DArray< long > | histogram_ |
Histogram array. More... | |
int | min_ |
minimum value. More... | |
int | max_ |
maximum value. More... | |
int | nBin_ |
number of bins. More... | |
int | nSample_ |
Number of sampled values in Histogram. More... | |
int | nReject_ |
Number of sampled values that were out of range. More... | |
Additional Inherited Members | |
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typedef BinaryFileOArchive | OArchive |
Type of output archive used by save method. More... | |
typedef BinaryFileIArchive | IArchive |
Type of input archive used by load method. More... | |
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static void | initStatic () |
Initialize static echo member to false. More... | |
static void | setEcho (bool echo=true) |
Enable or disable echoing for all subclasses of ParamComponent. More... | |
static bool | echo () |
Get echo parameter. More... | |
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void | setClassName (const char *className) |
Set class name string. More... | |
void | setIsRequired (bool isRequired) |
Set or unset the isActive flag. More... | |
void | setIsActive (bool isActive) |
Set or unset the isActive flag. More... | |
void | setParent (ParamComponent ¶m, bool next=true) |
Set this to the parent of a child component. More... | |
void | addComponent (ParamComponent ¶m, bool isLeaf=true) |
Add a new ParamComponent object to the format array. More... | |
template<typename Type > | |
ScalarParam< Type > & | add (std::istream &in, const char *label, Type &value, bool isRequired=true) |
Add a new required ScalarParam < Type > object. More... | |
template<typename Type > | |
CArrayParam< Type > & | addCArray (std::istream &in, const char *label, Type *value, int n, bool isRequired=true) |
Add (but do not read) a required C array parameter. More... | |
template<typename Type > | |
DArrayParam< Type > & | addDArray (std::istream &in, const char *label, DArray< Type > &array, int n, bool isRequired=true) |
Add (but do not read) a DArray < Type > parameter. More... | |
template<typename Type , int N> | |
FArrayParam< Type, N > & | addFArray (std::istream &in, const char *label, FArray< Type, N > &array, bool isRequired=true) |
Add (but do not read) a FArray < Type, N > array parameter. More... | |
template<typename Type , int N> | |
FSArrayParam< Type, N > & | addFSArray (std::istream &in, const char *label, FSArray< Type, N > &array, int size, bool isRequired=true) |
Add (but do not read) a FSArray < Type, N > array parameter. More... | |
template<typename Type > | |
CArray2DParam< Type > & | addCArray2D (std::istream &in, const char *label, Type *value, int m, int n, int np, bool isRequired=true) |
Add (but do not read) a CArray2DParam < Type > 2D C-array. More... | |
template<typename Type > | |
DMatrixParam< Type > & | addDMatrix (std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n, bool isRequired=true) |
Add and read a required DMatrix < Type > matrix parameter. More... | |
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ParamComponent () | |
Constructor. More... | |
ParamComponent (const ParamComponent &other) | |
Copy constructor. More... | |
A distribution (or histogram) of values for an int variable.
Definition at line 22 of file IntDistribution.h.
Util::IntDistribution::IntDistribution | ( | ) |
Default constructor.
Definition at line 18 of file IntDistribution.cpp.
References Util::ParamComposite::setClassName().
Util::IntDistribution::IntDistribution | ( | const IntDistribution & | other | ) |
Copy constructor.
other | object to be copied |
Definition at line 30 of file IntDistribution.cpp.
References Util::DArray< Data >::allocate(), Util::Array< Data >::capacity(), histogram_, max_, min_, nBin_, nReject_, and nSample_.
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Destructor.
Definition at line 96 of file IntDistribution.cpp.
IntDistribution & Util::IntDistribution::operator= | ( | const IntDistribution & | other | ) |
Assignment operator.
other | object to be assigned |
Definition at line 57 of file IntDistribution.cpp.
References Util::DArray< Data >::allocate(), Util::Array< Data >::capacity(), histogram_, max_, min_, nBin_, nReject_, and nSample_.
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Read parameters from file and initialize.
Read values of min, max, and nBin from file. Allocate histogram array and clear all accumulators.
in | input parameter file stream |
Reimplemented from Util::ParamComposite.
Definition at line 102 of file IntDistribution.cpp.
References Util::DArray< Data >::allocate(), clear(), histogram_, max_, min_, and nBin_.
void Util::IntDistribution::setParam | ( | int | min, |
int | max | ||
) |
Set parameters and initialize.
min | lower bound of range |
max | upper bound of range |
Definition at line 114 of file IntDistribution.cpp.
References Util::DArray< Data >::allocate(), clear(), histogram_, max(), max_, min(), min_, and nBin_.
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Load state from an archive.
ar | binary loading (input) archive. |
Reimplemented from Util::ParamComposite.
Definition at line 126 of file IntDistribution.cpp.
References Util::Array< Data >::capacity(), histogram_, max_, min_, nBin_, nReject_, nSample_, and UTIL_THROW.
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Save state to an archive.
ar | binary saving (output) archive. |
Reimplemented from Util::ParamComposite.
Definition at line 147 of file IntDistribution.cpp.
void Util::IntDistribution::serialize | ( | Archive & | ar, |
const unsigned int | version | ||
) |
Serialize to/from an archive.
ar | archive |
version | archive version id |
Definition at line 184 of file IntDistribution.h.
References histogram_, max_, min_, nBin_, nReject_, and nSample_.
void Util::IntDistribution::clear | ( | ) |
Clear (i.e., zero) previously allocated histogram.
Definition at line 153 of file IntDistribution.cpp.
References histogram_, nBin_, nReject_, and nSample_.
Referenced by readParameters(), and setParam().
void Util::IntDistribution::sample | ( | int | value | ) |
Sample a value.
value | current value |
Definition at line 165 of file IntDistribution.cpp.
References binIndex(), histogram_, max_, min_, nReject_, and nSample_.
void Util::IntDistribution::output | ( | std::ostream & | out | ) |
Output the distribution to file.
out | output stream |
Definition at line 180 of file IntDistribution.cpp.
References histogram_, min_, and nBin_.
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Return the index of the bin for a value.
value | sampled value |
Definition at line 159 of file IntDistribution.h.
References min_.
Referenced by sample().
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Get minimum value in range of histogram.
Definition at line 165 of file IntDistribution.h.
References min_.
Referenced by setParam().
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Get maximum value in range of histogram.
Definition at line 171 of file IntDistribution.h.
References max_.
Referenced by setParam().
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Get histogram array.
Each element of the histogram array simply contains the number of times that a particular value has been passed to the sample function since the histogram was last cleared.
Definition at line 140 of file IntDistribution.h.
References histogram_.
Referenced by pscfpp.field.Field::__init__(), pscfpp.field.Field::__str__(), pscfpp.field.Field::addColumn(), pscfpp.field.Field::deleteColumn(), pscfpp.field.Field::read(), and pscfpp.field.Field::reorder().
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Histogram array.
Definition at line 145 of file IntDistribution.h.
Referenced by clear(), data(), IntDistribution(), loadParameters(), operator=(), output(), readParameters(), sample(), serialize(), and setParam().
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minimum value.
Definition at line 146 of file IntDistribution.h.
Referenced by binIndex(), IntDistribution(), loadParameters(), min(), operator=(), output(), readParameters(), sample(), serialize(), and setParam().
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maximum value.
Definition at line 147 of file IntDistribution.h.
Referenced by IntDistribution(), loadParameters(), max(), operator=(), readParameters(), sample(), serialize(), and setParam().
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number of bins.
Definition at line 148 of file IntDistribution.h.
Referenced by clear(), IntDistribution(), loadParameters(), nBin(), operator=(), output(), readParameters(), serialize(), and setParam().
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Number of sampled values in Histogram.
Definition at line 149 of file IntDistribution.h.
Referenced by clear(), IntDistribution(), loadParameters(), operator=(), sample(), and serialize().
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Number of sampled values that were out of range.
Definition at line 150 of file IntDistribution.h.
Referenced by clear(), IntDistribution(), loadParameters(), operator=(), sample(), and serialize().