Synopsis

This analyzer identifies micellar clusters present in the system every interval steps and accumulates a histogram of observed cluster sizes, which is output at the end of the simulation.

Parameters

The parameter file format is:

ClusterHistogram{ 
   interval           int
   outputFileName     string
   speciesId          int
   atomTypeId         int
   cutoff             double
   histMin            int
   histMax            int
}

in which

interval	number of steps between data samples
outputFileName	name of output file
speciesId	integer index of molecular species
atomTypeId	integer index of selected (core block) atom type
cutoff	neighbor cutoff distance
histMin	minimum size (aggregation number) in histogram
histMax	maximum size (aggregation number) in histogram

Output Files

Output histogram of cluster size frequencies {outputFileName}.dat in two column format. Entries in the first column are values of aggregation number, i.e., the number of molecules in a cluster. Entries in the second column are probabilties of finding a cluster of that size in a single snapshot.