mcMd/trajectory/TrajectoryReader.h

#ifndef MCMD_TRAJECTORY_READER_H
#define MCMD_TRAJECTORY_READER_H

/*
* Simpatico - Simulation Package for Polymeric and Molecular Liquids
*
* Copyright 2010 - 2017, The Regents of the University of Minnesota
* Distributed under the terms of the GNU General Public License.
*/

#include <simp/boundary/Boundary.h>  // typedef
#include <util/global.h>

#include <iostream>

namespace McMd
{

   class Simulation;
   class System;

   using namespace Util;
   using namespace Simp;

   class TrajectoryReader
   {

   public:

      TrajectoryReader(System& system);

      virtual ~TrajectoryReader();

      virtual void open(std::string filename) = 0;

      virtual bool readFrame() = 0;

      virtual void close() = 0;

   protected:

      int nAtomTotal_;

      System &system() const;

      Simulation &simulation() const;

      Boundary &boundary() const;

      virtual void addMolecules();

   private:

      Boundary *boundaryPtr_;

      System *systemPtr_;

      Simulation *simulationPtr_;

   }; // end class TrajectoryReader

   // Inline functions

   /*
   * Get the parent System.
   */
   inline System& TrajectoryReader::system() const
   {
      assert(systemPtr_);
      return *systemPtr_;
   }

   /*
   * Get the parent Simulation.
   */
   inline Simulation& TrajectoryReader::simulation() const
   {
      assert(simulationPtr_);
      return *simulationPtr_;
   }

   /*
   * Get the Boundary.
   */
   inline Boundary& TrajectoryReader::boundary() const
   {
      assert(boundaryPtr_);
      return *boundaryPtr_;
   }

}
#endif