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Simpatico
v1.10
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This is the complete list of members for McMd::BondPotentialImpl< Interaction >, including all inherited members.
| add(std::istream &in, const char *label, Type &value, bool isRequired=true) | Util::ParamComposite | protected |
| addBegin(const char *label) | Util::ParamComposite | |
| addBlank() | Util::ParamComposite | |
| addCArray(std::istream &in, const char *label, Type *value, int n, bool isRequired=true) | Util::ParamComposite | protected |
| addCArray2D(std::istream &in, const char *label, Type *value, int m, int n, int np, bool isRequired=true) | Util::ParamComposite | protected |
| addComponent(ParamComponent ¶m, bool isLeaf=true) | Util::ParamComposite | protected |
| addDArray(std::istream &in, const char *label, DArray< Type > &array, int n, bool isRequired=true) | Util::ParamComposite | protected |
| addDMatrix(std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n, bool isRequired=true) | Util::ParamComposite | protected |
| addEnd() | Util::ParamComposite | |
| addFArray(std::istream &in, const char *label, FArray< Type, N > &array, bool isRequired=true) | Util::ParamComposite | protected |
| addForces() | McMd::BondPotentialImpl< Interaction > | virtual |
| addParamComposite(ParamComposite &child, bool next=true) | Util::ParamComposite | |
| atomEnergy(const Atom &atom) const | McMd::BondPotentialImpl< Interaction > | virtual |
| begin(int speciesId, System::MoleculeIterator &iterator) | McMd::SystemInterface | inlineprivate |
| begin(int speciesId, System::ConstMoleculeIterator &iterator) const | McMd::SystemInterface | inlineprivate |
| BondPotential() | McMd::BondPotential | |
| BondPotentialImpl(System &system) | McMd::BondPotentialImpl< Interaction > | |
| BondPotentialImpl(BondPotentialImpl< Interaction > &other) | McMd::BondPotentialImpl< Interaction > | |
| boundary() const | McMd::SystemInterface | inlineprivate |
| className() const | Util::ParamComposite | inline |
| clearCommunicator() | Util::MpiFileIo | |
| computeEnergy() | McMd::BondPotentialImpl< Interaction > | virtual |
| computeStress() | McMd::BondPotentialImpl< Interaction > | virtual |
| McMd::BondPotential::computeStress(Tensor &stress) | McMd::StressCalculator | |
| McMd::BondPotential::computeStress(Vector &pressures) | McMd::StressCalculator | |
| McMd::BondPotential::computeStress(double &pressure) | McMd::StressCalculator | |
| createsStress() const | McMd::StressCalculator | |
| echo() | Util::ParamComponent | static |
| energy(double rsq, int bondTypeId) const | McMd::BondPotentialImpl< Interaction > | virtual |
| McMd::EnergyCalculator::energy() | McMd::EnergyCalculator | |
| forceOverR(double rsq, int bondTypeId) const | McMd::BondPotentialImpl< Interaction > | virtual |
| get(std::string name, int type) const | McMd::BondPotentialImpl< Interaction > | inlinevirtual |
| hasAngles() const | McMd::SystemInterface | inlineprivate |
| hasBonds() const | McMd::SystemInterface | inlineprivate |
| hasDihedrals() const | McMd::SystemInterface | inlineprivate |
| hasExternal() const | McMd::SystemInterface | inlineprivate |
| hasIoCommunicator() const | Util::MpiFileIo | inline |
| hasLinks() const | McMd::SystemInterface | inlineprivate |
| IArchive typedef | Util::Serializable | |
| indent() const | Util::ParamComponent | |
| initStatic() | Util::ParamComponent | static |
| interaction() | McMd::BondPotentialImpl< Interaction > | inline |
| interaction() const | McMd::BondPotentialImpl< Interaction > | inline |
| interactionClassName() const | McMd::BondPotentialImpl< Interaction > | virtual |
| ioCommunicator() const | Util::MpiFileIo | inline |
| isActive() const | Util::ParamComposite | inline |
| isEmpty() const | McMd::SystemInterface | private |
| isIoProcessor() const | Util::MpiFileIo | inline |
| isRequired() const | Util::ParamComposite | inline |
| load(Serializable::IArchive &ar) | Util::ParamComposite | virtual |
| loadCArray(Serializable::IArchive &ar, const char *label, Type *value, int n, bool isRequired) | Util::ParamComposite | |
| loadCArray(Serializable::IArchive &ar, const char *label, Type *value, int n) | Util::ParamComposite | inline |
| loadCArray2D(Serializable::IArchive &ar, const char *label, Type *value, int m, int n, int np, bool isRequired) | Util::ParamComposite | |
| loadCArray2D(Serializable::IArchive &ar, const char *label, Type *value, int m, int n, int np) | Util::ParamComposite | |
| loadDArray(Serializable::IArchive &ar, const char *label, DArray< Type > &array, int n, bool isRequired) | Util::ParamComposite | |
| loadDArray(Serializable::IArchive &ar, const char *label, DArray< Type > &array, int n) | Util::ParamComposite | inline |
| loadDMatrix(Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int m, int n, bool isRequired) | Util::ParamComposite | |
| loadDMatrix(Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int m, int n) | Util::ParamComposite | inline |
| loadDSymmMatrix(Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int n, bool isRequired) | Util::ParamComposite | |
| loadDSymmMatrix(Serializable::IArchive &ar, const char *label, DMatrix< Type > &matrix, int n) | Util::ParamComposite | inline |
| loadFArray(Serializable::IArchive &ar, const char *label, FArray< Type, N > &array, bool isRequired) | Util::ParamComposite | |
| loadFArray(Serializable::IArchive &ar, const char *label, FArray< Type, N > &array) | Util::ParamComposite | inline |
| loadOptional(Serializable::IArchive &ar) | Util::ParamComposite | virtual |
| loadParamComposite(Serializable::IArchive &ar, ParamComposite &child, bool next=true) | Util::ParamComposite | |
| loadParamCompositeOptional(Serializable::IArchive &ar, ParamComposite &child, bool next=true) | Util::ParamComposite | |
| loadParameter(Serializable::IArchive &ar, const char *label, Type &value, bool isRequired) | Util::ParamComposite | |
| loadParameter(Serializable::IArchive &ar, const char *label, Type &value) | Util::ParamComposite | inline |
| loadParameters(Serializable::IArchive &ar) | McMd::BondPotentialImpl< Interaction > | virtual |
| MpiFileIo() | Util::MpiFileIo | |
| MpiFileIo(const MpiFileIo &other) | Util::MpiFileIo | |
| nAtom() const | McMd::SystemInterface | private |
| nMolecule(int speciesId) const | McMd::SystemInterface | inlineprivate |
| OArchive typedef | Util::Serializable | |
| ParamComponent() | Util::ParamComponent | protected |
| ParamComponent(const ParamComponent &other) | Util::ParamComponent | protected |
| ParamComposite() | Util::ParamComposite | |
| ParamComposite(const ParamComposite &other) | Util::ParamComposite | |
| ParamComposite(int capacity) | Util::ParamComposite | |
| randomBondLength(Random *random, double beta, int bondTypeId) const | McMd::BondPotentialImpl< Interaction > | virtual |
| read(std::istream &in, const char *label, Type &value) | Util::ParamComposite | |
| readBegin(std::istream &in, const char *label, bool isRequired=true) | Util::ParamComposite | |
| readBlank(std::istream &in) | Util::ParamComposite | |
| readCArray(std::istream &in, const char *label, Type *value, int n) | Util::ParamComposite | inline |
| readCArray2D(std::istream &in, const char *label, Type *value, int m, int n, int np) | Util::ParamComposite | inline |
| readDArray(std::istream &in, const char *label, DArray< Type > &array, int n) | Util::ParamComposite | inline |
| readDMatrix(std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n) | Util::ParamComposite | inline |
| readDSymmMatrix(std::istream &in, const char *label, DMatrix< Type > &matrix, int n) | Util::ParamComposite | inline |
| readEnd(std::istream &in) | Util::ParamComposite | |
| readFArray(std::istream &in, const char *label, FArray< Type, N > &array) | Util::ParamComposite | inline |
| readOptional(std::istream &in, const char *label, Type &value) | Util::ParamComposite | inline |
| readOptionalCArray(std::istream &in, const char *label, Type *value, int n) | Util::ParamComposite | inline |
| readOptionalCArray2D(std::istream &in, const char *label, Type *value, int m, int n, int np) | Util::ParamComposite | inline |
| readOptionalDArray(std::istream &in, const char *label, DArray< Type > &array, int n) | Util::ParamComposite | inline |
| readOptionalDMatrix(std::istream &in, const char *label, DMatrix< Type > &matrix, int m, int n) | Util::ParamComposite | inline |
| readOptionalDSymmMatrix(std::istream &in, const char *label, DMatrix< Type > &matrix, int n) | Util::ParamComposite | inline |
| readOptionalFArray(std::istream &in, const char *label, FArray< Type, N > &array) | Util::ParamComposite | inline |
| readParam(std::istream &in) | Util::ParamComposite | virtual |
| readParamComposite(std::istream &in, ParamComposite &child, bool next=true) | Util::ParamComposite | |
| readParamCompositeOptional(std::istream &in, ParamComposite &child, bool next=true) | Util::ParamComposite | |
| readParameters(std::istream &in) | McMd::BondPotentialImpl< Interaction > | virtual |
| readParamOptional(std::istream &in) | Util::ParamComposite | virtual |
| resetParam() | Util::ParamComposite | virtual |
| save(Serializable::OArchive &ar) | McMd::BondPotentialImpl< Interaction > | virtual |
| saveOptional(Serializable::OArchive &ar) | Util::ParamComposite | |
| serialize(Archive &ar, const unsigned int version) | Util::ParamComponent | |
| set(std::string name, int type, double value) | McMd::BondPotentialImpl< Interaction > | inlinevirtual |
| setClassName(const char *className) | Util::ParamComposite | protected |
| setEcho(bool echo=true) | Util::ParamComponent | static |
| setIndent(const ParamComponent &parent, bool next=true) | Util::ParamComponent | |
| setIoCommunicator(MPI::Intracomm &communicator) | Util::MpiFileIo | |
| setIsActive(bool isActive) | Util::ParamComposite | protected |
| setIsRequired(bool isRequired) | Util::ParamComposite | protected |
| setParent(ParamComponent ¶m, bool next=true) | Util::ParamComposite | protected |
| simulation() const | McMd::SystemInterface | inlineprivate |
| StressCalculator(bool createsStress=true) | McMd::StressCalculator | protected |
| system() const | McMd::SystemInterface | inlineprivate |
| SystemInterface(System &parent) | McMd::SystemInterface | private |
| unsetEnergy() | McMd::EnergyCalculator | virtual |
| unsetStress() | McMd::StressCalculator | virtual |
| writeParam(std::ostream &out) | Util::ParamComposite | virtual |
| ~BondPotential() | McMd::BondPotential | virtual |
| ~BondPotentialImpl() | McMd::BondPotentialImpl< Interaction > | virtual |
| ~ParamComponent() | Util::ParamComponent | virtual |
| ~ParamComposite() | Util::ParamComposite | virtual |
| ~Serializable() | Util::Serializable | inlinevirtual |
| ~SystemInterface() | McMd::SystemInterface | privatevirtual |
1.8.11