Simpatico
v1.10
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Molecule in a cluster.
A cluster is defined by a linked list of ClusterLink objects.
Definition at line 22 of file ClusterLink.h.
#include <ClusterLink.h>
Public Member Functions | |
void | clear () |
Set to default state. More... | |
void | setMolecule (Molecule &molecule) |
Set pointer to associated molecule. More... | |
Molecule & | molecule () const |
Get associated molecule by reference. More... | |
ClusterLink * | next () const |
Get pointer to next link in linked list. More... | |
int | clusterId () const |
Get cluster identifier. More... | |
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Set to default state.
Definition at line 69 of file ClusterLink.h.
Referenced by McMd::Cluster::clear().
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Set pointer to associated molecule.
Definition at line 78 of file ClusterLink.h.
References molecule().
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Get associated molecule by reference.
Definition at line 83 of file ClusterLink.h.
Referenced by McMd::Cluster::clusterCOM(), McMd::ClusterIdentifier::identifyClusters(), McMd::ClusterIdentifier::initialize(), McMd::ClusterIdentifier::isValid(), McMd::Cluster::momentTensor(), McMd::ClusterHistogram::sample(), and setMolecule().
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Get pointer to next link in linked list.
Definition at line 88 of file ClusterLink.h.
Referenced by McMd::Cluster::clear(), McMd::Cluster::clusterCOM(), McMd::Cluster::isValid(), McMd::Cluster::momentTensor(), McMd::ClusterHistogram::sample(), and McMd::Cluster::setId().
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Get cluster identifier.
Definition at line 93 of file ClusterLink.h.
Referenced by McMd::ClusterIdentifier::identifyClusters(), McMd::ClusterIdentifier::initialize(), McMd::Cluster::isValid(), and McMd::ClusterIdentifier::isValid().