|  lib |  | 
|  python |  | 
|  pscfpp |  | 
|  __init__.py |  | 
|  command.py |  | 
|  field.py |  | 
|  file.py |  | 
|  make.py |  | 
|  output.py |  | 
|  param.py |  | 
|  text.py |  | 
|  src |  | 
|  prdc |  | 
|  cpu |  | 
|  CField.cpp |  | 
|  CField.h |  | 
|  CField.tpp |  | 
|  CFieldComparison.cpp |  | 
|  CFieldComparison.h |  | 
|  CFieldComparison.tpp |  | 
|  complex.cpp |  | 
|  complex.h |  | 
|  cpu.mod |  | 
|  FFT.cpp |  | 
|  FFT.h |  | 
|  FFT.tpp |  | 
|  FftwDArray.h |  | 
|  FftwDArray.tpp |  | 
|  FieldBasisConverter.cpp |  | 
|  FieldBasisConverter.h |  | 
|  FieldBasisConverter.tpp |  | 
|  Reduce.cpp |  | 
|  Reduce.h |  | 
|  RField.cpp |  | 
|  RField.h |  | 
|  RField.tpp |  | 
|  RFieldComparison.cpp |  | 
|  RFieldComparison.h |  | 
|  RFieldDft.cpp |  | 
|  RFieldDft.h |  | 
|  RFieldDft.tpp |  | 
|  RFieldDftComparison.cpp |  | 
|  RFieldDftComparison.h |  | 
|  RFieldDftComparison.tpp |  | 
|  types.h |  | 
|  VecOp.cpp |  | 
|  VecOp.h |  | 
|  WaveList.cpp |  | 
|  WaveList.h |  | 
|  WaveList.tpp |  | 
|  crystal |  | 
|  Basis.cpp |  | 
|  Basis.h |  | 
|  Basis.tpp |  | 
|  BFieldComparison.cpp |  | 
|  BFieldComparison.h |  | 
|  crystal.mod |  | 
|  getDimension.cpp |  | 
|  getDimension.h |  | 
|  groupFile.cpp |  | 
|  groupFile.h |  | 
|  hasVariableAngle.cpp |  | 
|  hasVariableAngle.h |  | 
|  paramIdConversions.cpp |  | 
|  paramIdConversions.h |  | 
|  replicateUnitCell.cpp |  | 
|  replicateUnitCell.h |  | 
|  shiftToMinimum.cpp |  | 
|  shiftToMinimum.h |  | 
|  SpaceGroup.cpp |  | 
|  SpaceGroup.h |  | 
|  SpaceGroup.tpp |  | 
|  SpaceSymmetry.cpp |  | 
|  SpaceSymmetry.h |  | 
|  SpaceSymmetry.tpp |  | 
|  SymmetryGroup.cpp |  | 
|  SymmetryGroup.h |  | 
|  SymmetryGroup.tpp |  | 
|  TWave.h |  | 
|  UnitCell.h |  | 
|  UnitCell1.cpp |  | 
|  UnitCell2.cpp |  | 
|  UnitCell3.cpp |  | 
|  UnitCellBase.cpp |  | 
|  UnitCellBase.h |  | 
|  UnitCellBase.tpp |  | 
|  unitCellHeader.h |  | 
|  cuda |  | 
|  CField.cu |  | 
|  CField.h |  | 
|  CField.tpp |  | 
|  CFieldComparison.cu |  | 
|  CFieldComparison.h |  | 
|  CFieldComparison.tpp |  | 
|  complex.h |  | 
|  cuda.mod |  | 
|  FFT.cu |  | 
|  FFT.h |  | 
|  FFT.tpp |  | 
|  FFTBatched.cu |  | 
|  FFTBatched.h |  | 
|  FFTBatched.tpp |  | 
|  Reduce.cu |  | 
|  Reduce.h |  | 
|  resources.h |  | 
|  RField.cu |  | 
|  RField.h |  | 
|  RField.tpp |  | 
|  RFieldComparison.cu |  | 
|  RFieldComparison.h |  | 
|  RFieldComparison.tpp |  | 
|  RFieldDft.cu |  | 
|  RFieldDft.h |  | 
|  RFieldDft.tpp |  | 
|  RFieldDftComparison.cu |  | 
|  RFieldDftComparison.h |  | 
|  RFieldDftComparison.tpp |  | 
|  types.h |  | 
|  VecOp.cu |  | 
|  VecOp.h |  | 
|  VecOpMisc.cu |  | 
|  VecOpMisc.h |  | 
|  WaveList.cu |  | 
|  WaveList.h |  | 
|  WaveList.tpp |  | 
|  environment |  | 
|  Environment.cpp |  | 
|  Environment.h |  | 
|  environment.mod |  | 
|  FieldGenerator.cpp |  | 
|  FieldGenerator.h |  | 
|  FilmFieldGenExtBase.cpp |  | 
|  FilmFieldGenExtBase.h |  | 
|  FilmFieldGenExtBase.tpp |  | 
|  FilmFieldGenMaskBase.cpp |  | 
|  FilmFieldGenMaskBase.h |  | 
|  FilmFieldGenMaskBase.tpp |  | 
|  MixAndMatchEnv.cpp |  | 
|  MixAndMatchEnv.h |  | 
|  field |  | 
|  CFieldsTmpl.h |  | 
|  CFieldsTmpl.tpp |  | 
|  DomainTmpl.h |  | 
|  DomainTmpl.tpp |  | 
|  field.mod |  | 
|  fieldArrayUtil.h |  | 
|  FieldIoTmpl.h |  | 
|  FieldIoTmpl.tpp |  | 
|  fieldIoUtil.cpp |  | 
|  fieldIoUtil.h |  | 
|  fieldIoUtil.tpp |  | 
|  MaskTmpl.h |  | 
|  MaskTmpl.tpp |  | 
|  WFieldsTmpl.h |  | 
|  WFieldsTmpl.tpp |  | 
|  solvers |  | 
|  MixtureModifierPrdc.h |  | 
|  MixtureModifierPrdc.tpp |  | 
|  MixturePrdc.h |  | 
|  MixturePrdc.tpp |  | 
|  system |  | 
|  ScftThermoTmpl.h |  | 
|  ScftThermoTmpl.tpp |  | 
|  system.mod |  | 
|  SystemConstRefTmpl.h |  | 
|  SystemConstRefTmpl.tpp |  | 
|  SystemTmpl.h |  | 
|  SystemTmpl.tpp |  | 
|  edit.py |  | 
|  prdc.mod |  | 
|  pscf |  | 
|  chem |  | 
|  chem.mod |  | 
|  Debye.cpp |  | 
|  Debye.h |  | 
|  Edge.cpp |  | 
|  Edge.h |  | 
|  EdgeIterator.cpp |  | 
|  EdgeIterator.h |  | 
|  MixtureBase.cpp |  | 
|  MixtureBase.h |  | 
|  Monomer.cpp |  | 
|  Monomer.h |  | 
|  PolymerModel.cpp |  | 
|  PolymerModel.h |  | 
|  PolymerSpecies.cpp |  | 
|  PolymerSpecies.h |  | 
|  PolymerType.cpp |  | 
|  PolymerType.h |  | 
|  SolventSpecies.cpp |  | 
|  SolventSpecies.h |  | 
|  Species.cpp |  | 
|  Species.h |  | 
|  Vertex.cpp |  | 
|  Vertex.h |  | 
|  VertexIterator.cpp |  | 
|  VertexIterator.h |  | 
|  cuda |  | 
|  cuda.mod |  | 
|  cudaErrorCheck.h |  | 
|  CudaRandom.cu |  | 
|  CudaRandom.h |  | 
|  DeviceArray.h |  | 
|  HostDArray.h |  | 
|  ThreadArray.cu |  | 
|  ThreadArray.h |  | 
|  ThreadMesh.cu |  | 
|  ThreadMesh.h |  | 
|  environment |  | 
|  environment.mod |  | 
|  EnvironmentBase.h |  | 
|  FieldGeneratorBase.cpp |  | 
|  FieldGeneratorBase.h |  | 
|  MixAndMatchEnvTmpl.h |  | 
|  MixAndMatchEnvTmpl.tpp |  | 
|  floryHuggins |  | 
|  Clump.cpp |  | 
|  Clump.h |  | 
|  floryHuggins.mod |  | 
|  Mixture.cpp |  | 
|  Mixture.h |  | 
|  Molecule.cpp |  | 
|  Molecule.h |  | 
|  inter |  | 
|  inter.mod |  | 
|  Interaction.cpp |  | 
|  Interaction.h |  | 
|  iterator |  | 
|  AmbdInteraction.cpp |  | 
|  AmbdInteraction.h |  | 
|  AmIteratorDArray.h |  | 
|  AmIteratorDArray.tpp |  | 
|  AmIteratorTmpl.h |  | 
|  AmIteratorTmpl.tpp |  | 
|  iterator.mod |  | 
|  NanException.cpp |  | 
|  NanException.h |  | 
|  math |  | 
|  complex.h |  | 
|  FieldComparison.h |  | 
|  FieldComparison.tpp |  | 
|  IntVec.cpp |  | 
|  IntVec.h |  | 
|  LuSolver.cpp |  | 
|  LuSolver.h |  | 
|  math.mod |  | 
|  RealVec.h |  | 
|  TridiagonalSolver.cpp |  | 
|  TridiagonalSolver.h |  | 
|  Vec.h |  | 
|  mesh |  | 
|  Mesh.cpp |  | 
|  Mesh.h |  | 
|  mesh.mod |  | 
|  Mesh.tpp |  | 
|  MeshIterator.cpp |  | 
|  MeshIterator.h |  | 
|  MeshIterator.tpp |  | 
|  MeshIteratorFortran.cpp |  | 
|  MeshIteratorFortran.h |  | 
|  MeshIteratorFortran.tpp |  | 
|  solvers |  | 
|  BlockTmpl.h |  | 
|  BlockTmpl.tpp |  | 
|  MixtureTmpl.h |  | 
|  MixtureTmpl.tpp |  | 
|  PolymerTmpl.h |  | 
|  PolymerTmpl.tpp |  | 
|  PropagatorTmpl.h |  | 
|  solvers.mod |  | 
|  sweep |  | 
|  ParameterModifier.cpp |  | 
|  ParameterModifier.h |  | 
|  ParameterType.cpp |  | 
|  ParameterType.h |  | 
|  sweep.mod |  | 
|  SweepTmpl.h |  | 
|  SweepTmpl.tpp |  | 
|  edit.py |  | 
|  paths.h | File containing absolute paths to data, for use in code and tests  | 
|  pscf.mod |  | 
|  r1d |  | 
|  domain |  | 
|  Domain.cpp |  | 
|  Domain.h |  | 
|  domain.mod |  | 
|  GeometryMode.cpp |  | 
|  GeometryMode.h |  | 
|  iterator |  | 
|  AmIterator.cpp |  | 
|  AmIterator.h |  | 
|  BinaryRelaxIterator.cpp |  | 
|  BinaryRelaxIterator.h |  | 
|  Iterator.cpp |  | 
|  Iterator.h |  | 
|  iterator.mod |  | 
|  IteratorFactory.cpp |  | 
|  IteratorFactory.h |  | 
|  NrIterator.cpp |  | 
|  NrIterator.h |  | 
|  misc |  | 
|  FieldIo.cpp |  | 
|  FieldIo.h |  | 
|  HomogeneousComparison.cpp |  | 
|  HomogeneousComparison.h |  | 
|  solvers |  | 
|  Block.cpp |  | 
|  Block.h |  | 
|  Mixture.cpp |  | 
|  Mixture.h |  | 
|  Polymer.cpp |  | 
|  Polymer.h |  | 
|  Propagator.cpp |  | 
|  Propagator.h |  | 
|  Solvent.cpp |  | 
|  Solvent.h |  | 
|  solvers.mod |  | 
|  sweep |  | 
|  LinearSweep.cpp |  | 
|  LinearSweep.h |  | 
|  Sweep.cpp |  | 
|  Sweep.h |  | 
|  sweep.mod |  | 
|  SweepFactory.cpp |  | 
|  SweepFactory.h |  | 
|  SweepParameter.cpp |  | 
|  SweepParameter.h |  | 
|  edit.py |  | 
|  pscf_1d.cpp |  | 
|  r1d.mod |  | 
|  System.cpp |  | 
|  System.h |  | 
|  SystemAccess.cpp |  | 
|  SystemAccess.h |  | 
|  rpc |  | 
|  environment |  | 
|  environment.mod |  | 
|  EnvironmentFactory.cpp |  | 
|  EnvironmentFactory.h |  | 
|  EnvironmentFactory.tpp |  | 
|  FilmEnvironment.cpp |  | 
|  FilmEnvironment.h |  | 
|  FilmFieldGenExt.cpp |  | 
|  FilmFieldGenExt.h |  | 
|  FilmFieldGenExt.tpp |  | 
|  FilmFieldGenMask.cpp |  | 
|  FilmFieldGenMask.h |  | 
|  FilmFieldGenMask.tpp |  | 
|  field |  | 
|  BFieldComparison.cpp |  | 
|  BFieldComparison.h |  | 
|  CFields.cpp |  | 
|  CFields.h |  | 
|  Domain.cpp |  | 
|  Domain.h |  | 
|  Domain.tpp |  | 
|  field.mod |  | 
|  FieldIo.cpp |  | 
|  FieldIo.h |  | 
|  FieldIo.tpp |  | 
|  Mask.cpp |  | 
|  Mask.h |  | 
|  Mask.tpp |  | 
|  WFields.cpp |  | 
|  WFields.h |  | 
|  WFields.tpp |  | 
|  fts |  | 
|  analyzer |  | 
|  Analyzer.cpp |  | 
|  Analyzer.h |  | 
|  analyzer.mod |  | 
|  Analyzer.tpp |  | 
|  AnalyzerFactory.cpp |  | 
|  AnalyzerFactory.h |  | 
|  AnalyzerFactory.tpp |  | 
|  AnalyzerManager.cpp |  | 
|  AnalyzerManager.h |  | 
|  AnalyzerManager.tpp |  | 
|  AverageAnalyzer.cpp |  | 
|  AverageAnalyzer.h |  | 
|  AverageAnalyzer.tpp |  | 
|  AverageListAnalyzer.cpp |  | 
|  AverageListAnalyzer.h |  | 
|  AverageListAnalyzer.tpp |  | 
|  BinaryStructureFactorGrid.cpp |  | 
|  BinaryStructureFactorGrid.h |  | 
|  BinaryStructureFactorGrid.tpp |  | 
|  ChiDerivative.cpp |  | 
|  ChiDerivative.h |  | 
|  ChiDerivative.tpp |  | 
|  ConcentrationDerivative.cpp |  | 
|  ConcentrationDerivative.h |  | 
|  ConcentrationDerivative.tpp |  | 
|  ConcentrationWriter.cpp |  | 
|  ConcentrationWriter.h |  | 
|  ConcentrationWriter.tpp |  | 
|  FourthOrderParameter.cpp |  | 
|  FourthOrderParameter.h |  | 
|  FourthOrderParameter.tpp |  | 
|  HamiltonianAnalyzer.cpp |  | 
|  HamiltonianAnalyzer.h |  | 
|  HamiltonianAnalyzer.tpp |  | 
|  MaxOrderParameter.cpp |  | 
|  MaxOrderParameter.h |  | 
|  MaxOrderParameter.tpp |  | 
|  PerturbationDerivative.cpp |  | 
|  PerturbationDerivative.h |  | 
|  PerturbationDerivative.tpp |  | 
|  StepLogger.cpp |  | 
|  StepLogger.h |  | 
|  StepLogger.tpp |  | 
|  TrajectoryWriter.cpp |  | 
|  TrajectoryWriter.h |  | 
|  TrajectoryWriter.tpp |  | 
|  brownian |  | 
|  BdSimulator.cpp |  | 
|  BdSimulator.h |  | 
|  BdSimulator.tpp |  | 
|  BdStep.cpp |  | 
|  BdStep.h |  | 
|  BdStep.tpp |  | 
|  BdStepFactory.cpp |  | 
|  BdStepFactory.h |  | 
|  BdStepFactory.tpp |  | 
|  brownian.mod |  | 
|  ExplicitBdStep.cpp |  | 
|  ExplicitBdStep.h |  | 
|  ExplicitBdStep.tpp |  | 
|  LMBdStep.cpp |  | 
|  LMBdStep.h |  | 
|  LMBdStep.tpp |  | 
|  PredCorrBdStep.cpp |  | 
|  PredCorrBdStep.h |  | 
|  PredCorrBdStep.tpp |  | 
|  compressor |  | 
|  AmCompressor.cpp |  | 
|  AmCompressor.h |  | 
|  AmCompressor.tpp |  | 
|  Compressor.h |  | 
|  compressor.mod |  | 
|  CompressorFactory.cpp |  | 
|  CompressorFactory.h |  | 
|  CompressorFactory.tpp |  | 
|  IntraCorrelation.cpp |  | 
|  IntraCorrelation.h |  | 
|  IntraCorrelation.tpp |  | 
|  LrAmCompressor.cpp |  | 
|  LrAmCompressor.h |  | 
|  LrAmCompressor.tpp |  | 
|  LrCompressor.cpp |  | 
|  LrCompressor.h |  | 
|  LrCompressor.tpp |  | 
|  montecarlo |  | 
|  ForceBiasMove.cpp |  | 
|  ForceBiasMove.h |  | 
|  ForceBiasMove.tpp |  | 
|  McMove.cpp |  | 
|  McMove.h |  | 
|  McMove.tpp |  | 
|  McMoveFactory.cpp |  | 
|  McMoveFactory.h |  | 
|  McMoveFactory.tpp |  | 
|  McMoveManager.cpp |  | 
|  McMoveManager.h |  | 
|  McMoveManager.tpp |  | 
|  McSimulator.cpp |  | 
|  McSimulator.h |  | 
|  McSimulator.tpp |  | 
|  montecarlo.mod |  | 
|  RealMove.cpp |  | 
|  RealMove.h |  | 
|  RealMove.tpp |  | 
|  perturbation |  | 
|  EinsteinCrystalPerturbation.cpp |  | 
|  EinsteinCrystalPerturbation.h |  | 
|  EinsteinCrystalPerturbation.tpp |  | 
|  Perturbation.cpp |  | 
|  Perturbation.h |  | 
|  perturbation.mod |  | 
|  Perturbation.tpp |  | 
|  PerturbationFactory.cpp |  | 
|  PerturbationFactory.h |  | 
|  PerturbationFactory.tpp |  | 
|  ramp |  | 
|  LinearRamp.cpp |  | 
|  LinearRamp.h |  | 
|  LinearRamp.tpp |  | 
|  Ramp.cpp |  | 
|  Ramp.h |  | 
|  ramp.mod |  | 
|  Ramp.tpp |  | 
|  RampFactory.cpp |  | 
|  RampFactory.h |  | 
|  RampFactory.tpp |  | 
|  RampParameter.h |  | 
|  RampParameter.tpp |  | 
|  simulator |  | 
|  SimState.cpp |  | 
|  SimState.h |  | 
|  SimState.tpp |  | 
|  Simulator.cpp |  | 
|  Simulator.h |  | 
|  Simulator.tpp |  | 
|  SimulatorFactory.cpp |  | 
|  SimulatorFactory.h |  | 
|  SimulatorFactory.tpp |  | 
|  trajectory |  | 
|  RGridTrajectoryReader.cpp |  | 
|  RGridTrajectoryReader.h |  | 
|  RGridTrajectoryReader.tpp |  | 
|  trajectory.mod |  | 
|  TrajectoryReader.cpp |  | 
|  TrajectoryReader.h |  | 
|  TrajectoryReader.tpp |  | 
|  TrajectoryReaderFactory.cpp |  | 
|  TrajectoryReaderFactory.h |  | 
|  TrajectoryReaderFactory.tpp |  | 
|  fts.mod |  | 
|  scft |  | 
|  iterator |  | 
|  AmIteratorBasis.cpp |  | 
|  AmIteratorBasis.h |  | 
|  AmIteratorBasis.tpp |  | 
|  AmIteratorGrid.cpp |  | 
|  AmIteratorGrid.h |  | 
|  AmIteratorGrid.tpp |  | 
|  Iterator.cpp |  | 
|  Iterator.h |  | 
|  iterator.mod |  | 
|  Iterator.tpp |  | 
|  IteratorFactory.cpp |  | 
|  IteratorFactory.h |  | 
|  IteratorFactory.tpp |  | 
|  sweep |  | 
|  BasisFieldState.cpp |  | 
|  BasisFieldState.h |  | 
|  BasisFieldState.tpp |  | 
|  FieldState.cpp |  | 
|  FieldState.h |  | 
|  FieldState.tpp |  | 
|  LinearSweep.cpp |  | 
|  LinearSweep.h |  | 
|  LinearSweep.tpp |  | 
|  Sweep.cpp |  | 
|  Sweep.h |  | 
|  sweep.mod |  | 
|  Sweep.tpp |  | 
|  SweepFactory.cpp |  | 
|  SweepFactory.h |  | 
|  SweepFactory.tpp |  | 
|  SweepParameter.h |  | 
|  SweepParameter.tpp |  | 
|  scft.mod |  | 
|  ScftThermo.cpp |  | 
|  ScftThermo.h |  | 
|  solvers |  | 
|  Block.cpp |  | 
|  Block.h |  | 
|  Block.tpp |  | 
|  Mixture.cpp |  | 
|  Mixture.h |  | 
|  Mixture.tpp |  | 
|  MixtureModifier.cpp |  | 
|  MixtureModifier.h |  | 
|  Polymer.cpp |  | 
|  Polymer.h |  | 
|  Polymer.tpp |  | 
|  Propagator.cpp |  | 
|  Propagator.h |  | 
|  Propagator.tpp |  | 
|  Solvent.cpp |  | 
|  Solvent.h |  | 
|  Solvent.tpp |  | 
|  solver.mod |  | 
|  system |  | 
|  System.cpp |  | 
|  System.h |  | 
|  system.mod |  | 
|  SystemConstRef.cpp |  | 
|  SystemConstRef.h |  | 
|  Types.h |  | 
|  edit.py |  | 
|  pscf_pc.cpp |  | 
|  rpc.mod |  | 
|  rpg |  | 
|  environment |  | 
|  environment.mod |  | 
|  EnvironmentFactory.cu |  | 
|  EnvironmentFactory.h |  | 
|  EnvironmentFactory.tpp |  | 
|  FilmEnvironment.cu |  | 
|  FilmEnvironment.h |  | 
|  FilmFieldGenExt.cu |  | 
|  FilmFieldGenExt.h |  | 
|  FilmFieldGenExt.tpp |  | 
|  FilmFieldGenMask.cu |  | 
|  FilmFieldGenMask.h |  | 
|  FilmFieldGenMask.tpp |  | 
|  field |  | 
|  CFields.cu |  | 
|  CFields.h |  | 
|  Domain.cu |  | 
|  Domain.h |  | 
|  Domain.tpp |  | 
|  field.mod |  | 
|  FieldIo.cu |  | 
|  FieldIo.h |  | 
|  FieldIo.tpp |  | 
|  HostDArrayComplex.cu |  | 
|  HostDArrayComplex.h |  | 
|  Mask.cu |  | 
|  Mask.h |  | 
|  Mask.tpp |  | 
|  WFields.cu |  | 
|  WFields.h |  | 
|  WFields.tpp |  | 
|  fts |  | 
|  analyzer |  | 
|  Analyzer.cu |  | 
|  Analyzer.h |  | 
|  analyzer.mod |  | 
|  Analyzer.tpp |  | 
|  AnalyzerFactory.cu |  | 
|  AnalyzerFactory.h |  | 
|  AnalyzerFactory.tpp |  | 
|  AnalyzerManager.cu |  | 
|  AnalyzerManager.h |  | 
|  AnalyzerManager.tpp |  | 
|  AverageAnalyzer.cu |  | 
|  AverageAnalyzer.h |  | 
|  AverageAnalyzer.tpp |  | 
|  AverageListAnalyzer.cu |  | 
|  AverageListAnalyzer.h |  | 
|  AverageListAnalyzer.tpp |  | 
|  BinaryStructureFactorGrid.cu |  | 
|  BinaryStructureFactorGrid.h |  | 
|  BinaryStructureFactorGrid.tpp |  | 
|  ChiDerivative.cu |  | 
|  ChiDerivative.h |  | 
|  ChiDerivative.tpp |  | 
|  ConcentrationDerivative.cu |  | 
|  ConcentrationDerivative.h |  | 
|  ConcentrationDerivative.tpp |  | 
|  ConcentrationWriter.cu |  | 
|  ConcentrationWriter.h |  | 
|  ConcentrationWriter.tpp |  | 
|  FourthOrderParameter.cu |  | 
|  FourthOrderParameter.h |  | 
|  FourthOrderParameter.tpp |  | 
|  HamiltonianAnalyzer.cu |  | 
|  HamiltonianAnalyzer.h |  | 
|  HamiltonianAnalyzer.tpp |  | 
|  MaxOrderParameter.cu |  | 
|  MaxOrderParameter.h |  | 
|  MaxOrderParameter.tpp |  | 
|  PerturbationDerivative.cu |  | 
|  PerturbationDerivative.h |  | 
|  PerturbationDerivative.tpp |  | 
|  StepLogger.cu |  | 
|  StepLogger.h |  | 
|  StepLogger.tpp |  | 
|  TrajectoryWriter.cu |  | 
|  TrajectoryWriter.h |  | 
|  TrajectoryWriter.tpp |  | 
|  brownian |  | 
|  BdSimulator.cu |  | 
|  BdSimulator.h |  | 
|  BdSimulator.tpp |  | 
|  BdStep.cu |  | 
|  BdStep.h |  | 
|  BdStep.tpp |  | 
|  BdStepFactory.cu |  | 
|  BdStepFactory.h |  | 
|  BdStepFactory.tpp |  | 
|  brownian.mod |  | 
|  ExplicitBdStep.cu |  | 
|  ExplicitBdStep.h |  | 
|  ExplicitBdStep.tpp |  | 
|  LMBdStep.cu |  | 
|  LMBdStep.h |  | 
|  LMBdStep.tpp |  | 
|  PredCorrBdStep.cu |  | 
|  PredCorrBdStep.h |  | 
|  PredCorrBdStep.tpp |  | 
|  compressor |  | 
|  AmCompressor.cu |  | 
|  AmCompressor.h |  | 
|  AmCompressor.tpp |  | 
|  Compressor.h |  | 
|  compressor.mod |  | 
|  CompressorFactory.cu |  | 
|  CompressorFactory.h |  | 
|  CompressorFactory.tpp |  | 
|  IntraCorrelation.cu |  | 
|  IntraCorrelation.h |  | 
|  IntraCorrelation.tpp |  | 
|  LrAmCompressor.cu |  | 
|  LrAmCompressor.h |  | 
|  LrAmCompressor.tpp |  | 
|  LrCompressor.cu |  | 
|  LrCompressor.h |  | 
|  LrCompressor.tpp |  | 
|  montecarlo |  | 
|  ForceBiasMove.cu |  | 
|  ForceBiasMove.h |  | 
|  ForceBiasMove.tpp |  | 
|  McMove.cu |  | 
|  McMove.h |  | 
|  McMove.tpp |  | 
|  McMoveFactory.cu |  | 
|  McMoveFactory.h |  | 
|  McMoveFactory.tpp |  | 
|  McMoveManager.cu |  | 
|  McMoveManager.h |  | 
|  McMoveManager.tpp |  | 
|  McSimulator.cu |  | 
|  McSimulator.h |  | 
|  McSimulator.tpp |  | 
|  montecarlo.mod |  | 
|  RealMove.cu |  | 
|  RealMove.h |  | 
|  RealMove.tpp |  | 
|  perturbation |  | 
|  EinsteinCrystalPerturbation.cu |  | 
|  EinsteinCrystalPerturbation.h |  | 
|  EinsteinCrystalPerturbation.tpp |  | 
|  Perturbation.cu |  | 
|  Perturbation.h |  | 
|  perturbation.mod |  | 
|  Perturbation.tpp |  | 
|  PerturbationFactory.cu |  | 
|  PerturbationFactory.h |  | 
|  PerturbationFactory.tpp |  | 
|  ramp |  | 
|  LinearRamp.cu |  | 
|  LinearRamp.h |  | 
|  LinearRamp.tpp |  | 
|  Ramp.cu |  | 
|  Ramp.h |  | 
|  ramp.mod |  | 
|  Ramp.tpp |  | 
|  RampFactory.cu |  | 
|  RampFactory.h |  | 
|  RampFactory.tpp |  | 
|  RampParameter.h |  | 
|  RampParameter.tpp |  | 
|  simulator |  | 
|  SimState.cu |  | 
|  SimState.h |  | 
|  SimState.tpp |  | 
|  Simulator.cu |  | 
|  Simulator.h |  | 
|  Simulator.tpp |  | 
|  SimulatorFactory.cu |  | 
|  SimulatorFactory.h |  | 
|  SimulatorFactory.tpp |  | 
|  trajectory |  | 
|  RGridTrajectoryReader.cu |  | 
|  RGridTrajectoryReader.h |  | 
|  RGridTrajectoryReader.tpp |  | 
|  trajectory.mod |  | 
|  TrajectoryReader.cu |  | 
|  TrajectoryReader.h |  | 
|  TrajectoryReader.tpp |  | 
|  TrajectoryReaderFactory.cu |  | 
|  TrajectoryReaderFactory.h |  | 
|  TrajectoryReaderFactory.tpp |  | 
|  fts.mod |  | 
|  VecOpFts.cu |  | 
|  VecOpFts.h |  | 
|  scft |  | 
|  iterator |  | 
|  AmIteratorBasis.cu |  | 
|  AmIteratorBasis.h |  | 
|  AmIteratorBasis.tpp |  | 
|  AmIteratorGrid.cu |  | 
|  AmIteratorGrid.h |  | 
|  AmIteratorGrid.tpp |  | 
|  Iterator.cu |  | 
|  Iterator.h |  | 
|  iterator.mod |  | 
|  Iterator.tpp |  | 
|  IteratorFactory.cu |  | 
|  IteratorFactory.h |  | 
|  IteratorFactory.tpp |  | 
|  sweep |  | 
|  BasisFieldState.cu |  | 
|  BasisFieldState.h |  | 
|  BasisFieldState.tpp |  | 
|  FieldState.cu |  | 
|  FieldState.h |  | 
|  FieldState.tpp |  | 
|  LinearSweep.cu |  | 
|  LinearSweep.h |  | 
|  LinearSweep.tpp |  | 
|  Sweep.cu |  | 
|  Sweep.h |  | 
|  sweep.mod |  | 
|  Sweep.tpp |  | 
|  SweepFactory.cu |  | 
|  SweepFactory.h |  | 
|  SweepFactory.tpp |  | 
|  SweepParameter.h |  | 
|  SweepParameter.tpp |  | 
|  scft.mod |  | 
|  ScftThermo.cu |  | 
|  ScftThermo.h |  | 
|  solvers |  | 
|  Block.cu |  | 
|  Block.h |  | 
|  Block.tpp |  | 
|  Mixture.cu |  | 
|  Mixture.h |  | 
|  Mixture.tpp |  | 
|  MixtureModifier.cu |  | 
|  MixtureModifier.h |  | 
|  Polymer.cu |  | 
|  Polymer.h |  | 
|  Polymer.tpp |  | 
|  Propagator.cu |  | 
|  Propagator.h |  | 
|  Propagator.tpp |  | 
|  Solvent.cu |  | 
|  Solvent.h |  | 
|  Solvent.tpp |  | 
|  solver.mod |  | 
|  system |  | 
|  System.cu |  | 
|  System.h |  | 
|  system.mod |  | 
|  SystemConstRef.cu |  | 
|  SystemConstRef.h |  | 
|  Types.h |  | 
|  pscf_pg.cu |  | 
|  rpg.mod |  | 
|  test |  | 
|  examples |  | 
|  example1.cpp |  | 
|  example2.cpp |  | 
|  example3.cpp |  | 
|  CommandLine.h |  | 
|  CompositeTestRunner.h |  | 
|  ParamFileTest.h |  | 
|  test.mod |  | 
|  TestException.h |  | 
|  TestRunner.h |  | 
|  UnitTest.h |  | 
|  UnitTestRunner.h |  | 
|  util |  | 
|  accumulators |  | 
|  accumulators.mod |  | 
|  AutoCorr.h |  | 
|  AutoCorrArray.h |  | 
|  AutoCorrelation.h |  | 
|  AutoCorrelation.tpp |  | 
|  AutoCorrStage.h |  | 
|  AutoCorrStage.tpp |  | 
|  Average.cpp |  | 
|  Average.h |  | 
|  AverageStage.cpp |  | 
|  AverageStage.h |  | 
|  Distribution.cpp |  | 
|  Distribution.h |  | 
|  IntDistribution.cpp |  | 
|  IntDistribution.h |  | 
|  MeanSqDispArray.h |  | 
|  product.h |  | 
|  RadialDistribution.cpp |  | 
|  RadialDistribution.h |  | 
|  setToZero.h |  | 
|  SymmTensorAverage.cpp |  | 
|  SymmTensorAverage.h |  | 
|  TensorAverage.cpp |  | 
|  TensorAverage.h |  | 
|  archives |  | 
|  BinaryFileIArchive.cpp |  | 
|  BinaryFileIArchive.h |  | 
|  BinaryFileOArchive.cpp |  | 
|  BinaryFileOArchive.h |  | 
|  Byte.h |  | 
|  MemoryCounter.cpp |  | 
|  MemoryCounter.h |  | 
|  MemoryIArchive.cpp |  | 
|  MemoryIArchive.h |  | 
|  MemoryOArchive.cpp |  | 
|  MemoryOArchive.h |  | 
|  Serializable.h |  | 
|  Serializable_includes.h |  | 
|  serialize.h |  | 
|  serialize.mod |  | 
|  TextFileIArchive.cpp |  | 
|  TextFileIArchive.h |  | 
|  TextFileOArchive.cpp |  | 
|  TextFileOArchive.h |  | 
|  XdrFileIArchive.cpp |  | 
|  XdrFileIArchive.h |  | 
|  XdrFileOArchive.cpp |  | 
|  XdrFileOArchive.h |  | 
|  containers |  | 
|  Array.h |  | 
|  ArrayIterator.h |  | 
|  ArraySet.h |  | 
|  ArrayStack.h |  | 
|  ConstArrayIterator.h |  | 
|  ConstPArrayIterator.h |  | 
|  containers.mod |  | 
|  DArray.h |  | 
|  DMatrix.h |  | 
|  DPArray.h |  | 
|  DRaggedMatrix.h |  | 
|  DSArray.h |  | 
|  FArray.h |  | 
|  FMatrix.h |  | 
|  FPArray.h |  | 
|  FSArray.h |  | 
|  GArray.h |  | 
|  GPArray.h |  | 
|  GridArray.h |  | 
|  GStack.h |  | 
|  List.h |  | 
|  ListArray.h |  | 
|  ListIterator.h |  | 
|  Matrix.h |  | 
|  Node.h |  | 
|  Pair.h |  | 
|  PArray.h |  | 
|  PArrayIterator.h |  | 
|  RaggedMatrix.h |  | 
|  RArray.h |  | 
|  RingBuffer.h |  | 
|  SSet.h |  | 
|  format |  | 
|  Bool.cpp |  | 
|  Bool.h |  | 
|  Dbl.cpp |  | 
|  Dbl.h |  | 
|  Format.cpp |  | 
|  Format.h |  | 
|  format.mod |  | 
|  Int.cpp |  | 
|  Int.h |  | 
|  Lng.cpp |  | 
|  Lng.h |  | 
|  Str.cpp |  | 
|  Str.h |  | 
|  write.cpp |  | 
|  write.h |  | 
|  math |  | 
|  Binomial.cpp |  | 
|  Binomial.h |  | 
|  CardinalBSpline.cpp |  | 
|  CardinalBSpline.h |  | 
|  Constants.cpp |  | 
|  Constants.h |  | 
|  feq.h |  | 
|  gcd.h |  | 
|  math.mod |  | 
|  Polynomial.cpp |  | 
|  Polynomial.h |  | 
|  Rational.cpp |  | 
|  Rational.h |  | 
|  misc |  | 
|  Bit.cpp |  | 
|  Bit.h |  | 
|  Exception.cpp |  | 
|  Exception.h |  | 
|  FileMaster.cpp |  | 
|  FileMaster.h |  | 
|  FlagSet.cpp |  | 
|  FlagSet.h |  | 
|  initStatic.cpp |  | 
|  initStatic.h |  | 
|  ioUtil.cpp |  | 
|  ioUtil.h |  | 
|  Log.cpp |  | 
|  Log.h |  | 
|  Memory.cpp |  | 
|  Memory.h |  | 
|  misc.mod |  | 
|  Notifier.h |  | 
|  Observer.h |  | 
|  Offset.h |  | 
|  Setable.h |  | 
|  Timer.cpp |  | 
|  Timer.h |  | 
|  mpi |  | 
|  mpi.mod |  | 
|  MpiFileIo.cpp |  | 
|  MpiFileIo.h |  | 
|  MpiLoader.h |  | 
|  MpiLogger.cpp |  | 
|  MpiLogger.h |  | 
|  MpiSendRecv.cpp |  | 
|  MpiSendRecv.h |  | 
|  MpiStructBuilder.cpp |  | 
|  MpiStructBuilder.h |  | 
|  MpiTraits.cpp |  | 
|  MpiTraits.h |  | 
|  pack.h |  | 
|  param |  | 
|  ArrayParam.h |  | 
|  ArrayParam.tpp |  | 
|  Begin.cpp |  | 
|  Begin.h |  | 
|  Blank.cpp |  | 
|  Blank.h |  | 
|  BracketPolicy.cpp |  | 
|  BracketPolicy.h |  | 
|  CArray2DParam.h |  | 
|  CArrayParam.h |  | 
|  DArrayParam.h |  | 
|  DMatrixParam.h |  | 
|  DSymmMatrixParam.h |  | 
|  End.cpp |  | 
|  End.h |  | 
|  Factory.h |  | 
|  FArrayParam.h |  | 
|  FSArrayParam.h |  | 
|  Label.cpp |  | 
|  Label.h |  | 
|  Manager.h |  | 
|  manager.mod |  | 
|  MatrixParam.h |  | 
|  MatrixParam.tpp |  | 
|  OptionalLabel.cpp |  | 
|  OptionalLabel.h |  | 
|  param.mod |  | 
|  ParamComponent.cpp |  | 
|  ParamComponent.h |  | 
|  ParamComposite.cpp |  | 
|  ParamComposite.h |  | 
|  Parameter.cpp |  | 
|  Parameter.h |  | 
|  ScalarParam.h |  | 
|  pointer |  | 
|  FlexPtr.h |  | 
|  isNull.h |  | 
|  ScopedPtr.h |  | 
|  random |  | 
|  mersenne |  | 
|  mtrand.cpp |  | 
|  mtrand.h |  | 
|  Ar1Process.cpp |  | 
|  Ar1Process.h |  | 
|  Random.cpp |  | 
|  Random.h |  | 
|  random.mod |  | 
|  signal |  | 
|  IFunctor.h |  | 
|  MethodFunctor.h |  | 
|  Signal.cpp |  | 
|  Signal.h |  | 
|  signal.mod |  | 
|  space |  | 
|  Dimension.h |  | 
|  Grid.cpp |  | 
|  Grid.h |  | 
|  IntVector.cpp |  | 
|  IntVector.h |  | 
|  space.mod |  | 
|  Tensor.cpp |  | 
|  Tensor.h |  | 
|  Vector.cpp |  | 
|  Vector.h |  | 
|  xmltag |  | 
|  XmlAttribute.cpp |  | 
|  XmlAttribute.h |  | 
|  XmlBase.cpp |  | 
|  XmlBase.h |  | 
|  XmlEndTag.cpp |  | 
|  XmlEndTag.h |  | 
|  XmlStartTag.cpp |  | 
|  XmlStartTag.h |  | 
|  xmltag.mod |  | 
|  XmlXmlTag.cpp |  | 
|  XmlXmlTag.h |  | 
|  global.h | File containing preprocessor macros for error handling  | 
|  util.mod |  | 
|  programs.mod |  |